PXD012432-2

PXD012432 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	MSI-1 knockdown in MB002 medulloblastoma cell line
Description	MSI-1 is a RNA-binding protein that is required for normal neural stem cell and brain cancer stem cells. To understand its molecular mechanisms in medulloblastoma, we peroformed whole-cell proteomic analysis in MB002 medulloblastoma cells, after knockdown of MSI-1.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:31:24.091.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Yu Lu
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	TMT6plex-126 reporter+balance reagent acylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2019-01-18 07:42:29	ID requested
1	2022-02-15 09:06:47	announced
⏵ 2	2024-10-22 05:31:25	announced	2024-10-22: Updated project metadata.

Publication List

Xing S, Wang J, Wu R, Hefti MM, Crary JF, Lu Y, Identification of HnRNPC as a novel Tau exon 10 splicing factor using RNA antisense purification mass spectrometry. RNA Biol, 19(1):104-116(2022) [pubmed]
10.1080/15476286.2021.2015175;

Xing S, Wang J, Wu R, Hefti MM, Crary JF, Lu Y, Identification of HnRNPC as a novel Tau exon 10 splicing factor using RNA antisense purification mass spectrometry. RNA Biol, 19(1):104-116(2022) [pubmed]

10.1080/15476286.2021.2015175;

Keyword List

curator keyword: Biomedical
submitter keyword: Human, medulloblastoma, MSI-1

curator keyword: Biomedical

submitter keyword: Human, medulloblastoma, MSI-1

Contact List

Yu Lu
contact affiliation	Stem Cell and Cancer Research Institute McMaster University
contact email	yu.lu@mcmaster.ca
lab head
Yu Lu
contact affiliation	McMaster University
contact email	yu.lu@mcmaster.ca
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/02/PXD012432
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/02/PXD012432

PRIDE project URI

Repository Record List

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