PXD012373 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Nuclear pore component Nup155 is part of the p53 network in liver cancer |
Description | Cancer-relevant signalling pathways rely on bidirectional nucleocytoplasmic transport events through the nuclear pore complex (NPC). However, mechanisms by which individual NPC components (Nups) participate in the regulation of these pathways remain poorly understood. We discovered by integrating large scale proteomics, polysome fractionation and a focused RNAi approach that Nup155 controls mRNA translation of p21 (CDKN1A), a key mediator of the p53 response. The underlying mechanism involves transcriptional regulation of the putative tRNA and rRNA methyltransferase FTSJ1 by Nup155. Furthermore, we observed that Nup155 and FTSJ1 are p53 repression targets and accordingly found a correlation between the p53 status, Nup155 and FTSJ1 expression in murine and human hepatocellular carcinoma (HCC). Our data suggest an unanticipated regulatory network linking translational control by and repression of a structural NPC component modulating the p53 pathway through its effectors. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_04:52:16.912.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Alessandro Ori |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | 4x(2)H labeled dimethylated L-lysine; acetylated residue; N6,N6-dimethyl-L-lysine; iodoacetamide derivatized residue |
Instrument | LTQ Orbitrap Velos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2019-01-16 05:13:05 | ID requested | |
1 | 2019-04-09 08:26:36 | announced | |
2 | 2019-05-19 23:57:22 | announced | Updated publication reference for PubMed record(s): 31089132. |
⏵ 3 | 2024-10-22 04:52:25 | announced | 2024-10-22: Updated project metadata. |
Publication List
10.1038/s41467-019-10133-z; |
Holzer K, Ori A, Cooke A, Dauch D, Drucker E, Riemenschneider P, Andres-Pons A, DiGuilio AL, Mackmull MT, Ba, ß, ler J, Roessler S, Breuhahn K, Zender L, Glavy JS, Dombrowski F, Hurt E, Schirmacher P, Beck M, Singer S, Nucleoporin Nup155 is part of the p53 network in liver cancer. Nat Commun, 10(1):2147(2019) [pubmed] |
Keyword List
curator keyword: Biomedical |
submitter keyword: cancer,liver, nuclear pore, p53 |
Contact List
Alessandro Ori |
contact affiliation | Leibniz Institute on Aging – Fritz Lipmann Institute (FLI), Jena, Germany |
contact email | alessandro.ori@leibniz-fli.de |
lab head | |
Alessandro Ori |
contact affiliation | Leibniz Institute on Aging |
contact email | aleori@gmail.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD012373
- Label: PRIDE project
- Name: Nuclear pore component Nup155 is part of the p53 network in liver cancer