PXD012060-1

PXD012060 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	BALF secretome and exosome proteomics
Description	A systems-level pharmacoproteomics study of a standardized murine model of toll-like receptor (TLR)3-NFκB/RelA innated inflammation in the absence or presence of a highly selective Brd4 (ZL0454) or nonselective Bromodomain and Extraterminal domain inhibitor (JQ1).
HostingRepository	PRIDE
AnnounceDate	2019-07-16
AnnouncementXML	Submission_2019-07-16_03:48:49.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Yingxin Zhao
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-12-14 01:26:25	ID requested
⏵ 1	2019-07-16 03:48:51	announced
2	2024-10-22 03:59:51	announced	2024-10-22: Updated project metadata.

Publication List

Zhao Y, Tian B, Sun H, Zhang J, Zhang Y, Ivannikov M, Motamedi M, Liu Z, Zhou J, Kaphalia L, Calhoun WJ, Maroto R, Brasier AR, Pharmacoproteomics reveal novel protective activity of bromodomain containing 4 inhibitors on vascular homeostasis in TLR3-mediated airway remodeling. J Proteomics, 205():103415(2019) [pubmed]

Zhao Y, Tian B, Sun H, Zhang J, Zhang Y, Ivannikov M, Motamedi M, Liu Z, Zhou J, Kaphalia L, Calhoun WJ, Maroto R, Brasier AR, Pharmacoproteomics reveal novel protective activity of bromodomain containing 4 inhibitors on vascular homeostasis in TLR3-mediated airway remodeling. J Proteomics, 205():103415(2019) [pubmed]

Keyword List

curator keyword: Biomedical
submitter keyword: bromodomain containing protein 4
bronchoalveolar lavage fluid proteomics
airway fibrosis
epithelial mesenchymal transition
pericytes
mass spectrometry

curator keyword: Biomedical

submitter keyword: bromodomain containing protein 4

bronchoalveolar lavage fluid proteomics

airway fibrosis

epithelial mesenchymal transition

pericytes

mass spectrometry

Contact List

Yingxin Zhao, Ph.D.
contact affiliation	University of Texas Medical Branch
contact email	yizhao@utmb.edu
lab head
Yingxin Zhao
contact affiliation	University of Texas Medical Branch
contact email	yizhao@utmb.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/07/PXD012060
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/07/PXD012060

PRIDE project URI

Repository Record List

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