PXD011726-2

PXD011726 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	E. coli BW25113 proteomics in nutrient-rich and minimal medium
Description	E. coli BW25113 growth in a nutrient-rich medium supplemented with 20 proteinogenic amino acid medium was studied and compared to growth in minimal medium. Proteome data from these experiments revealed significant differences in amino acid synthesis and transport proteins that were reduced in the nutrient-rich meidum. Changes in energy production and conversion proteins were also observed as in nutrient-rich conditions pyruvate dehydrogenase complex and acetate producing proteins increased, while the TCA cycle proteins decreased.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:50:35.364.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Karl Peebo
SpeciesList	scientific name: Escherichia coli; NCBI TaxID: 562;
ModificationList	iodoacetamide derivatized residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-11-19 07:53:41	ID requested
1	2020-02-18 07:26:49	announced
⏵ 2	2024-10-22 04:50:35	announced	2024-10-22: Updated project metadata.

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

curator keyword: Biological
submitter keyword: E. coli Rich medium

curator keyword: Biological

submitter keyword: E. coli Rich medium

Contact List

Raivo Vilu
contact affiliation	head of R&D in Center of Food and Fermentation Technologies
contact email	raivo@tftak.eu
lab head
Karl Peebo
contact affiliation	Center of Food and Fermentation Technologies
contact email	karl@tftak.eu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/02/PXD011726
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/02/PXD011726

PRIDE project URI

Repository Record List

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