PXD011721-1

PXD011721 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	The circadian clock components BMAL1 and Rev-Erb regulate flavivirus replication
Description	detection and qunatitation of proteins by mass spectromerty to see the effect of drug treatment in human cell lines.
HostingRepository	PRIDE
AnnounceDate	2024-10-07
AnnouncementXML	Submission_2024-10-07_10:20:57.326.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD011721
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Abhinav Kumar
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	Oxidation
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-11-16 01:36:20	ID requested
⏵ 1	2024-10-07 10:20:58	announced

Publication List

10.1038/s41467-019-08299-7;
10.6019/PXD011721;
Zhuang X, Magri A, Hill M, Lai AG, Kumar A, Rambhatla SB, Donald CL, Lopez-Clavijo AF, Rudge S, Pinnick K, Chang WH, Wing PAC, Brown R, Qin X, Simmonds P, Baumert TF, Ray D, Loudon A, Balfe P, Wakelam M, Butterworth S, Kohl A, Jopling CL, Zitzmann N, McKeating JA, regulate flavivirus replication. Nat Commun, 10(1):377(2019) [pubmed]

10.1038/s41467-019-08299-7;

10.6019/PXD011721;

Zhuang X, Magri A, Hill M, Lai AG, Kumar A, Rambhatla SB, Donald CL, Lopez-Clavijo AF, Rudge S, Pinnick K, Chang WH, Wing PAC, Brown R, Qin X, Simmonds P, Baumert TF, Ray D, Loudon A, Balfe P, Wakelam M, Butterworth S, Kohl A, Jopling CL, Zitzmann N, McKeating JA, regulate flavivirus replication. Nat Commun, 10(1):377(2019) [pubmed]

Keyword List

submitter keyword: DDA, PRM

submitter keyword: DDA, PRM

Contact List

Prof. Nicole Zitzmann
contact affiliation	Oxford Glycobiology Institute, Department of Biochemistry, University of Oxford, UK
contact email	nicole.zitzmann@bioch.ox.ac.uk
lab head
Abhinav Kumar
contact affiliation	Oxford University
contact email	Abhinav.Kumar@bioch.ox.ac.uk
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/11/PXD011721
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/11/PXD011721

PRIDE project URI

Repository Record List

[ + ]