PXD010901 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Further evidence for sustainable alternatives to replace threatened animal horn based on quantitative proteomic analysis |
Description | In the present study, a quantitative proteomic approach was used to analyse and compare the proteome in horns from endangered species (rhinoceros, Saiga antelope, and Tibetan antelope) and common species (yak, water buffalo, and goat) based on the isobaric tag for relative and absolute quantification (iTRAQ) techniques. In total, 591 proteins were identified, and 321 were quantified and categorised based on molecular function, cellular component, and biological process. Principal component analysis (PCA) and hierarchical clustering analysis (HCA) results based on differences in the amount of protein identified three major clusters, and proteins including transglutaminase, desmocollin, and elongation factors were selected as trait components from proteomic patterns of horn samples from different species. Quantitative proteomic analysis-based strategies can therefore provide further evidence for sustainable alternatives to replace animal horn from threatened species. |
HostingRepository | PRIDE |
AnnounceDate | 2022-03-02 |
AnnouncementXML | Submission_2022-03-02_02:50:36.338.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Rui Liu |
SpeciesList | scientific name: Laurasiatheria; NCBI TaxID: 314145; |
ModificationList | No PTMs are included in the dataset |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2018-08-28 07:10:48 | ID requested | |
⏵ 1 | 2022-03-02 02:50:36 | announced | |
2 | 2024-10-22 05:34:54 | announced | 2024-10-22: Updated project metadata. |
Publication List
Dataset with its publication pending |
Keyword List
curator keyword: Biological |
submitter keyword: iTRAQ, proteomics, animal horn, principal component analysis, clustering |
Contact List
Rui Liu |
contact affiliation | Jiangsu Collaborative Innovation Center of Chinese Medicinal Resources Industrialization, and National and Local Collaborative Engineering Center of Chinese Medicinal Resources Industrialization and Formulae Innovative Medicine, Nanjing 210023, PR China |
contact email | cpulr@126.com |
lab head | |
Rui Liu |
contact affiliation | Nanjing University of Chinese Medicine |
contact email | cpulr@126.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD010901
- Label: PRIDE project
- Name: Further evidence for sustainable alternatives to replace threatened animal horn based on quantitative proteomic analysis