PXD010836-3

PXD010836 is an original dataset announced via ProteomeXchange.

Title	Proteome of the cellulose degradation system of Cytophaga hutchinsonii and Sporocytophaga myxococcoides
Description	Both C. hutchinsonii and S. myxococcoides were grown on filter paper. Time points were taken in both early and late stages of growth to assess the cellulolytic proteins utilized during growth. As a non-cellulose control, the organisms were grown on pectin as sole carbon source. Further, the cells were also fractionated to seperate the cellular fractions in order to assess the localization of the proteins within the growing cells.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:13:19.093.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Johan Larsbrink
SpeciesList	scientific name: Sporocytophaga myxococcoides; NCBI TaxID: 153721; scientific name: Cytophaga hutchinsonii; NCBI TaxID: 985;
ModificationList	monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue; deamidated residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2018-08-21 08:07:06	ID requested
1	2018-11-06 08:16:48	announced
2	2018-12-04 03:58:42	announced	Updated project metadata.
⏵ 3	2024-10-22 04:13:19	announced	2024-10-22: Updated project metadata.

Dataset with its publication pending

curator keyword: Biological, Biomedical

submitter keyword: cellulose, Proteome, Sporocytophaga myxococcoides, Bacteroidetes,Cytophaga hutchinsonii, CAZy

Johan Larsbrink
contact affiliation	Chalmers University of Technology, Department of Biology and Biological Engineering, Division of Industrial Biotechnology
contact email	johan.larsbrink@chalmers.se
lab head
Johan Larsbrink
contact affiliation	Chalmers University of Technology
contact email	johan.larsbrink@chalmers.se
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/11/PXD010836

PRIDE project URI

• PRIDE
  1. PXD010836
     1. Label: PRIDE project
     2. Name: Proteome of the cellulose degradation system of Cytophaga hutchinsonii and Sporocytophaga myxococcoides