PXD010692-1

PXD010692 is an original dataset announced via ProteomeXchange.

Title	Proteomic analysis of plasmodesmata from Populus cell suspension cultures
Description	In this project, we have investigated the proteome of the plasmodesmata (PD) enriched membrane fraction from poplar cell suspension cultures and quantitatively compared its protein composition with other membrane fractions. We build on the previously published literature on the PD proteome by using semiquantitative methods and, for the first time, demonstrate in vitro callose synthase activity from Populus PD proteins. To our knowledge, this study is the first proteomic investigation of the PD performed on a tree species.
HostingRepository	PRIDE
AnnounceDate	2018-12-31
AnnouncementXML	Submission_2018-12-31_03:29:00.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Vaibhav Srivastava
SpeciesList	scientific name: Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa); NCBI TaxID: 3694;
ModificationList	Ethanolyl
Instrument	Q-Tof ultima

Revision	Datetime	Status	ChangeLog Entry
0	2018-08-06 04:00:54	ID requested
⏵ 1	2018-12-31 03:29:02	announced

Leijon F, Melzer M, Zhou Q, Srivastava V, Bulone V, Cell Suspension Cultures in Relation With Callose Biosynthesis. Front Plant Sci, 9():1681(2018) [pubmed]

curator keyword: Biological

submitter keyword: Populus, plasmodesmata, callose synthase, callose, mass spectrometry, spectral counting

Vaibhav Srivastava
contact affiliation	Division of Glycoscience, School of Engineering Sciences in Chemistry, Biotechnology and Health, Royal Institute of Technology (KTH), AlbaNova University Centre, Stockholm, Sweden
contact email	vasri@kth.se
lab head
Vaibhav Srivastava
contact affiliation	Biotechnology
contact email	vasri@kth.se
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/12/PXD010692

PRIDE project URI

• PRIDE
  1. PXD010692
     1. Label: PRIDE project
     2. Name: Proteomic analysis of plasmodesmata from Populus cell suspension cultures