PXD010630 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Improvement of Peptide Separation for Exploring the Missing Proteins Localized on Membranes |
Description | How to separate hydrophobic peptides and to prevent loss of such peptides, nevertheless, have not been drawn enough attention (19). As a membrane protein possesses higher hydrophobicity, especially for one with multiple bilayer-exposed domains, efficient detection of hydrophobic peptides becomes a critical issue for its identification. It is generally recognized that MPs have two characteristics, relatively shorter sequences of amino acids and higher hydrophobicity. |
HostingRepository | PRIDE |
AnnounceDate | 2018-10-24 |
AnnouncementXML | Submission_2019-02-09_13:15:11.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | He Yanbin |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue; deamidated residue |
Instrument | Orbitrap Fusion Lumos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2018-07-31 06:16:25 | ID requested | |
1 | 2018-10-24 03:26:19 | announced | |
⏵ 2 | 2019-02-09 13:15:12 | announced | Updated publication reference for PubMed record(s): 30362765. |
Publication List
Zhang Y, Lin Z, Hao P, Hou K, Sui Y, Zhang K, He Y, Li H, Yang H, Liu S, Ren Y, Improvement of Peptide Separation for Exploring the Missing Proteins Localized on Membranes. J Proteome Res, 17(12):4152-4159(2018) [pubmed] |
Keyword List
curator keyword: Technical |
submitter keyword: Missing proteins,High concentration organic solvent, Membrane fraction,LC MS/MS |
Contact List
Siqi Liu |
contact affiliation | Professor and Director Center of Proteomic Analysis BGI-Shenzhen |
contact email | siqiliu@genomics.cn |
lab head | |
He Yanbin |
contact affiliation | +86 18565610792 |
contact email | heyanbin@genomics.cn |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/10/PXD010630 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD010630
- Label: PRIDE project
- Name: Improvement of Peptide Separation for Exploring the Missing Proteins Localized on Membranes