PXD010607 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Streptomyces sp. M7 LC-MS |
Description | Streptomyces sp. M7 has demonstrated ability to remove lindane from culture media and soils. In this study, we used MS-based label-free quantitative proteomic to understand lindane degradation and its metabolic context in Streptomyces sp. M7. We identified the proteins involved in the up-stream degradation pathway. Our results demonstrated that mineralization of lindane is feasible since proteins from an unusual down-stream degradation pathway were also identified. Degradative steps were supported by an active catabolism that supplied energy and reducing equivalents in the form of NADPH. This is the first study in which degradation steps of an organochlorine compound and metabolic context are elucidate in a biotechnological genus as Streptomyces. These results serve as basement to study other degradative actinobacteria and to improve the degradation processes of Streptomyces sp. M7. |
HostingRepository | PRIDE |
AnnounceDate | 2018-08-10 |
AnnouncementXML | Submission_2018-08-10_06:27:27.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Jose Davila Costa |
SpeciesList | scientific name: Streptomyces coelicolor A3(2); NCBI TaxID: 100226; |
ModificationList | carbamoylated residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2018-07-30 02:01:47 | ID requested | |
⏵ 1 | 2018-08-10 06:27:28 | announced | |
2 | 2020-03-12 03:42:03 | announced | 2020-03-12: Updated project metadata. |
Publication List
Dataset with its publication pending |
Keyword List
curator keyword: Biological |
submitter keyword: Streptomyces sp. M7, Lindane, Degradation |
Contact List
Jose Sebastian Davila Costa |
contact affiliation | Actinobacteria Laboratory, PROIMI-CONICET, Tucuman-Argentina |
contact email | jsdavilacosta@gmail.com |
lab head | |
Jose Davila Costa |
contact affiliation | PROIMI-CONICET |
contact email | jsdavilacosta@gmail.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD010607
- Label: PRIDE project
- Name: Streptomyces sp. M7 LC-MS