PXD010546 is an
original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Expression of proteins by a marine Brevibacterium casei strain in response to elevated levels of Cadmium |
| Description | A marine bacterial isolate, Brevibacterium casei was grown in LB broth in presence of 50ppm Cadmium (provided in the form cadmium chloride, with final concentration of Cadmium at 50ppm). The cells were harvested at different time intervals and proteins extracted from these using indigenous protocol developed in laboratory. Similarly, the strain was grown in absence of Cadmium and same steps were followed, which was treated as control. The proteins extracted from test as well control set were digested using trypsin following standard protocol. Trypsin digests were injected in LCMS QToF for obtaining spectral library which was used to identify the proteins against NCBI database |
| HostingRepository | PRIDE |
| AnnounceDate | 2026-07-31 |
| AnnouncementXML | Submission_2026-07-31_08:29:34.006.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Samir Damare |
| SpeciesList | scientific name: Brevibacterium casei; NCBI TaxID: NEWT:33889; |
| ModificationList | iodoacetamide derivatized residue |
| Instrument | 6538 Q-TOF LC/MS |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|
| 0 | 2018-07-24 07:54:01 | ID requested | |
| ⏵ 1 | 2026-07-31 08:29:34 | announced | |
Publication List
Keyword List
| curator keyword: Biological |
| submitter keyword: In solution digestion, LCMS-QToF, Cadmium, Bacteria,Heavy metal |
Contact List
| Dr Samir R Damare |
|---|
| contact affiliation | CSIR-National Institute of Oceanography, Biological Oceanography Division |
| contact email | samir@nio.org |
| lab head | |
| Samir Damare |
|---|
| contact affiliation | CSIR-National Institute of Oceanography |
| contact email | samir@nio.org |
| dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2026/07/PXD010546 |
| PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD010546
- Label: PRIDE project
- Name: Expression of proteins by a marine Brevibacterium casei strain in response to elevated levels of Cadmium
