PXD010358-1

PXD010358 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Lung proteome analysis of highly pathogenic avian influenza virus (H5N1) infection progression in chicken
Description	This study is planned to characterize the proteome profile of HPAI H5N1 virus infected chicken lung tissues to identify the molecular pathogenesis and proteomic determinant associate with disease progression in susceptible host.
HostingRepository	PRIDE
AnnounceDate	2024-10-08
AnnouncementXML	Submission_2024-10-08_11:40:09.226.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Anamika Mishra
SpeciesList	scientific name: Gallus gallus (Chicken); NCBI TaxID: 9031;
ModificationList	iTRAQ4plex-116 reporter+balance reagent acylated residue; acetylated residue; iodoacetamide derivatized residue
Instrument	Q-Tof Ultima

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-07-10 05:14:22	ID requested
⏵ 1	2024-10-08 11:40:12	announced

Publication List

Vijayakumar P, Raut AA, Chingtham S, Murugkar HV, Kulkarni DD, Sood R, Singh VP, Mishra A, Proteomic analysis of differential expression of lung proteins in response to highly pathogenic avian influenza virus infection in chickens. Arch Virol, 167(1):141-152(2022) [pubmed]
10.1007/s00705-021-05287-5;

Vijayakumar P, Raut AA, Chingtham S, Murugkar HV, Kulkarni DD, Sood R, Singh VP, Mishra A, Proteomic analysis of differential expression of lung proteins in response to highly pathogenic avian influenza virus infection in chickens. Arch Virol, 167(1):141-152(2022) [pubmed]

10.1007/s00705-021-05287-5;

Keyword List

curator keyword: Biomedical
submitter keyword: Chicken, Avian Influenza, LC-MS,Lung tissues, pathogenesis

curator keyword: Biomedical

submitter keyword: Chicken, Avian Influenza, LC-MS,Lung tissues, pathogenesis

Contact List

Anamika Mishra
contact affiliation	Pathogenomics laboratory, ICAR-National Institute of High Security Animal Disease, Bhopal, India
contact email	reach2anamika@yahoo.com
lab head
Anamika Mishra
contact affiliation	Scientist, ICAR-National Institute of High Security Animal Diseases
contact email	reach2anamika@yahoo.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/03/PXD010358
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/03/PXD010358

PRIDE project URI

Repository Record List

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