PXD010150-2

PXD010150 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Nanowell-Mediated Two-Dimensional Liquid Chromatography Proteome Profiling of Mammalian Cells
Description	Proteomic data from technical developments of a nanowell-mediated two-dimensional (2D) reversed-phase nanoflow liquid chromatography (LC) separation for in-depth proteome profiling of low-nanogram samples.
HostingRepository	PRIDE
AnnounceDate	2020-03-24
AnnouncementXML	Submission_2020-03-24_05:21:12.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD010150
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Matthew Monroe
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	Oxidation; Carbamidomethyl
Instrument	Orbitrap Fusion Lumos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-06-18 02:23:02	ID requested
1	2018-10-18 02:43:49	announced
⏵ 2	2020-03-24 05:21:14	announced	2020-03-24: Updated publication reference for PubMed record(s): 30210768, 32175737.

Publication List

Wang X, Swensen AC, Zhang T, Piehowski PD, Gaffrey MJ, Monroe ME, Zhu Y, Dong H, Qian WJ, Accurate Identification of Deamidation and Citrullination from Global Shotgun Proteomics Data Using a Dual-Search Delta Score Strategy. J Proteome Res, 19(4):1863-1872(2020) [pubmed]
Dou M, Zhu Y, Liyu A, Liang Y, Chen J, Piehowski PD, Xu K, Zhao R, Moore RJ, Atkinson MA, Mathews CE, Qian WJ, Kelly RT, 1000 mammalian cells. Chem Sci, 9(34):6944-6951(2018) [pubmed]

Wang X, Swensen AC, Zhang T, Piehowski PD, Gaffrey MJ, Monroe ME, Zhu Y, Dong H, Qian WJ, Accurate Identification of Deamidation and Citrullination from Global Shotgun Proteomics Data Using a Dual-Search Delta Score Strategy. J Proteome Res, 19(4):1863-1872(2020) [pubmed]

Dou M, Zhu Y, Liyu A, Liang Y, Chen J, Piehowski PD, Xu K, Zhao R, Moore RJ, Atkinson MA, Mathews CE, Qian WJ, Kelly RT, 1000 mammalian cells. Chem Sci, 9(34):6944-6951(2018) [pubmed]

Keyword List

curator keyword: Technical
submitter keyword: proteomics, microfluidics, 2D LC

curator keyword: Technical

submitter keyword: proteomics, microfluidics, 2D LC

Contact List

Ryan Kelly
contact affiliation	Pacific Northwest National Laboratory
contact email	ryan.kelly@pnnl.gov
lab head
Matthew Monroe
contact affiliation	Pacific Northwest National Laboratory
contact email	matthew.monroe@pnnl.gov
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/10/PXD010150
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/10/PXD010150

PRIDE project URI

Repository Record List

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