PXD010137 is an
original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Sucrose metabolism in haloarchaea: reassessment using genomics, proteomics and metagenomics |
| Description | We used quantitative proteomics (8-plex iTRAQ labeling) to investigate pathways and enzymes potentially important for sucrose metabolism in the halophilic archaeon Halohasta litchfieldiae. The data provided insights into the dynamics of the Hht. litchfieldiae proteome in response to sucrose, advancing the understanding of sucrose and fructose metabolism in haloarchaea. |
| HostingRepository | PRIDE |
| AnnounceDate | 2024-10-22 |
| AnnouncementXML | Submission_2024-10-22_04:45:53.347.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Timothy Williams |
| SpeciesList | scientific name: Halohasta litchfieldiae; NCBI TaxID: 1073996; |
| ModificationList | iTRAQ8plex-116 reporter+balance reagent acylated residue |
| Instrument | TripleTOF 5600 |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|
| 0 | 2018-06-15 02:08:05 | ID requested | |
| 1 | 2019-01-31 04:57:43 | announced | |
| ⏵ 2 | 2024-10-22 04:45:54 | announced | 2024-10-22: Updated project metadata. |
Publication List
| Williams TJ, Allen MA, Liao Y, Raftery MJ, Cavicchioli R, Sucrose Metabolism in Haloarchaea: Reassessment Using Genomics, Proteomics, and Metagenomics. Appl Environ Microbiol, 85(6):(2019) [pubmed] |
| 10.1128/aem.02935-18; |
Keyword List
| curator keyword: Biological |
| submitter keyword: fructose metabolism |
| archaea |
| sugar catabolism |
| microbial physiology |
| metabolic pathway |
| pathway reconstruction |
Contact List
| Ricardo Cavicchioli |
|---|
| contact affiliation | School of Biotechnology and Biomolecular Sciences, UNSW Sydney, Sydney, New South Wales, Australia. |
| contact email | r.cavicchioli@unsw.edu.au |
| lab head | |
| Timothy Williams |
|---|
| contact affiliation | University of New South Wales |
| contact email | t.williams@unsw.edu.au |
| dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/01/PXD010137 |
| PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD010137
- Label: PRIDE project
- Name: Sucrose metabolism in haloarchaea: reassessment using genomics, proteomics and metagenomics
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