PXD009818-3

PXD009818 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Dichomitus squalens partially tailors its molecular responses to the composition of solid wood
Description	The fungal response to compositional differences in softwood as measured by transcriptomics, proteomics and enzyme activities showed a partial tailoring to wood composition.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:10:55.156.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD009818
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Matthew Monroe
SpeciesList	scientific name: Dichomitus squalens; NCBI TaxID: 114155;
ModificationList	Oxidation
Instrument	LTQ Orbitrap Velos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-05-17 23:36:30	ID requested
1	2019-04-09 02:27:13	announced
2	2019-04-09 02:37:30	announced	Updated publication reference for PubMed record(s): 30246402.
⏵ 3	2024-10-22 04:10:57	announced	2024-10-22: Updated project metadata.

Publication List

10.1111/1462-2920.14416;
10.6019/PXD009818;
Daly P, L, ó, pez SC, Peng M, Lancefield CS, Purvine SO, Kim YM, Zink EM, Dohnalkova A, Singan VR, Lipzen A, Dilworth D, Wang M, Ng V, Robinson E, Orr G, Baker SE, Bruijnincx PCA, Hild, é, n KS, Grigoriev IV, M, ä, kel, ä MR, de Vries RP, Dichomitus squalens partially tailors its molecular responses to the composition of solid wood. Environ Microbiol, 20(11):4141-4156(2018) [pubmed]

10.1111/1462-2920.14416;

10.6019/PXD009818;

Daly P, L, ó, pez SC, Peng M, Lancefield CS, Purvine SO, Kim YM, Zink EM, Dohnalkova A, Singan VR, Lipzen A, Dilworth D, Wang M, Ng V, Robinson E, Orr G, Baker SE, Bruijnincx PCA, Hild, é, n KS, Grigoriev IV, M, ä, kel, ä MR, de Vries RP, Dichomitus squalens partially tailors its molecular responses to the composition of solid wood. Environ Microbiol, 20(11):4141-4156(2018) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: CAZymes, softwood, Dichomitus squalens,White-rot fungi, hardwood

curator keyword: Biological

submitter keyword: CAZymes, softwood, Dichomitus squalens,White-rot fungi, hardwood

Contact List

Ronald de Vries
contact affiliation	Westerdijk Fungal Biodiversity Institute
contact email	r.devries@westerdijkinstitute.nl
lab head
Matthew Monroe
contact affiliation	Pacific Northwest National Laboratory
contact email	matthew.monroe@pnnl.gov
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/04/PXD009818
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/04/PXD009818

PRIDE project URI

Repository Record List

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