PXD009697 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Improving silkworm genome annotation using a proteogenomics approach |
Description | We collected a total of 9.8 million mass spectra generated in the laboratory from the proteomics analyses of different silkworm tissues, including the posterior silk gland (PSG) 30, middle silk gland 31, ovary and testis 32, head 33, brain, prothoracic glands, subesophageal ganglion 34, hemolymph 35, fat body 36 and embryo 37,38 of domestic silkworm, and the posterior silk gland of wild silkworm 39. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_04:55:31.991.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Boxiong Zhong |
SpeciesList | scientific name: Bombyx mori (Silk moth); NCBI TaxID: 7091; |
ModificationList | acetylated residue |
Instrument | LTQ Orbitrap |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2018-05-07 05:10:47 | ID requested | |
1 | 2019-07-01 00:59:25 | announced | |
⏵ 2 | 2024-10-22 04:55:32 | announced | 2024-10-22: Updated project metadata. |
Publication List
10.1021/acs.jproteome.8b00965; |
Ye X, Tang X, Wang X, Che J, Wu M, Liang J, Ye L, Qian Q, Li J, You Z, Zhang Y, Wang S, Zhong B, Improving Silkworm Genome Annotation Using a Proteogenomics Approach. J Proteome Res, 18(8):3009-3019(2019) [pubmed] |
Keyword List
submitter keyword: gene function, silkworm, alternative splicing, transcriptomics,proteogenomics |
Contact List
Boxiong Zhong |
contact affiliation | College of Animal Sciences, Zhejiang University, Hangzhou, P. R. China |
contact email | bxzhong@zju.edu.cn |
lab head | |
Boxiong Zhong |
contact affiliation | Zhejiang university,china |
contact email | bxzhong@zju.edu.cn |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/07/PXD009697 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD009697
- Label: PRIDE project
- Name: Improving silkworm genome annotation using a proteogenomics approach