PXD009693-3

PXD009693 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Analysis of reversibly oxidized cysteines from the Chlamydomonas proteome with yeast spike-in
Description	Benchmarking dataset for the objective evaluation of quantitative and statistical workflows.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:44:55.439.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD009693
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Evan McConnell
SpeciesList	scientific name: Chlamydomonas reinhardtii; NCBI TaxID: 3055;
ModificationList	Oxidation; Acetyl; Carbamidomethyl
Instrument	TripleTOF 5600

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-05-07 04:56:29	ID requested
1	2019-03-19 03:55:25	announced
2	2019-03-20 06:51:57	announced	Updated publication reference for PubMed record(s): 30871482.
⏵ 3	2024-10-22 04:45:03	announced	2024-10-22: Updated project metadata.

Publication List

10.6019/PXD009693;
10.1186/s12859-019-2619-6;
Berg P, McConnell EW, Hicks LM, Popescu SC, Popescu GV, Evaluation of linear models and missing value imputation for the analysis of peptide-centric proteomics. BMC Bioinformatics, 20(Suppl 2):102(2019) [pubmed]

10.6019/PXD009693;

10.1186/s12859-019-2619-6;

Berg P, McConnell EW, Hicks LM, Popescu SC, Popescu GV, Evaluation of linear models and missing value imputation for the analysis of peptide-centric proteomics. BMC Bioinformatics, 20(Suppl 2):102(2019) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: yeast,Chlamydomonas reinhardtii, label-free quantification, redox proteomics

curator keyword: Biological

submitter keyword: yeast,Chlamydomonas reinhardtii, label-free quantification, redox proteomics

Contact List

Leslie M. Hicks
contact affiliation	Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599 USA
contact email	lmhicks@unc.edu
lab head
Evan McConnell
contact affiliation	Graduate Research Assistant
contact email	evanmcc@live.unc.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/03/PXD009693
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/03/PXD009693

PRIDE project URI

Repository Record List

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