PXD009686-1

PXD009686 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	LC-MSMS of leukemic cell line K562
Description	Comparative label free quantitative proteomic analysis using SWATH-MS has been carried out for K562 cells treated with Imatinib (S+IM) against untreated K562 (S) as well as imatinib resistant K562 cells (R). Compariosn of S+IM vs R constitutes Dataset 1 while that of S vs S+IM constitutes dataset 2
HostingRepository	PRIDE
AnnounceDate	2019-06-14
AnnouncementXML	Submission_2019-06-14_02:05:06.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Mythreyi Narasimhan
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	TripleTOF 5600

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-05-07 04:10:19	ID requested
⏵ 1	2019-06-14 02:05:07	announced

Publication List

Narasimhan M, Kannan S, Chawade A, Bhattacharjee A, Govekar R, Clinical biomarker discovery by SWATH-MS based label-free quantitative proteomics: impact of criteria for identification of differentiators and data normalization method. J Transl Med, 17(1):184(2019) [pubmed]

Narasimhan M, Kannan S, Chawade A, Bhattacharjee A, Govekar R, Clinical biomarker discovery by SWATH-MS based label-free quantitative proteomics: impact of criteria for identification of differentiators and data normalization method. J Transl Med, 17(1):184(2019) [pubmed]

Keyword List

curator keyword: Biomedical
submitter keyword: LC-MSMS, SWATH-MS, K562

curator keyword: Biomedical

submitter keyword: LC-MSMS, SWATH-MS, K562

Contact List

Dr. Rukmini Govekar
contact affiliation	Rukmini Lab, Advanced Centre for Treatment, Research & Education in Cancer (ACTREC) - Tata Memorial Centre (TMC), Navi Mumbai, India. Homi Bhabha National Institute, Mumbai, India
contact email	rgovekar@actrec.gon.in
lab head
Mythreyi Narasimhan
contact affiliation	ACTREC
contact email	mythreyinarasimhan@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/06/PXD009686
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/06/PXD009686

PRIDE project URI

Repository Record List

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