⮝ Full datasets listing
PXD009583-1
PXD009583 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Helicobacter pylori infection dysregulates gastric proteome |
| Description | The purpose of the study was to define gastric cell-specific proteomic changes, induced by H. pylori oncogenic strains, that are critical for initiation of the gastric carcinogenic cascade. Gastric cell scrapings were harvested from H. pylori-infected and uninfected animals for quantitative proteomic analyses using isobaric tags for relative and absolute quantitation (iTRAQ). Canonical and disease pathway mapping using Ingenuity Pathway Analysis (IPA) identified significantly altered inflammatory and cancer-signaling pathways that included Rab/Ras signaling proteins. |
| HostingRepository | PRIDE |
| AnnounceDate | 2018-11-23 |
| AnnouncementXML | Submission_2018-11-23_06:53:54.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Kristie Lindsey Rose |
| SpeciesList | scientific name: Meriones unguiculatus; NCBI TaxID: 10047; |
| ModificationList | iTRAQ4plex-116 reporter+balance reagent acylated residue; methylthiolated residue; monohydroxylated residue |
| Instrument | Q Exactive |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2018-04-24 02:58:18 | ID requested | |
| ⏵ 1 | 2018-11-23 06:53:55 | announced | |
| 2 | 2024-10-22 04:44:37 | announced | 2024-10-22: Updated project metadata. |
Publication List
Keyword List
| curator keyword: Biomedical |
| submitter keyword: Helicobacter pylor, gastric proteome |
Contact List
| Kristie Lindsey Rose | |
|---|---|
| contact affiliation | Vanderbilt Proteomics Core |
| contact email | kristie.rose@vanderbilt.edu |
| lab head | |
| Kristie Lindsey Rose | |
| contact affiliation | Vanderbilt university |
| contact email | kristie.rose@vanderbilt.edu |
| dataset submitter | |
Full Dataset Link List
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/11/PXD009583 |
| PRIDE project URI |
Repository Record List
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