PXD009403-2

PXD009403 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Upper airway proteomes of infants and children in sub-Saharan Africa
Description	Mass spectrometry-based proteomics was carried out on Naso- and oropharyngeal swabs collected from infants and children presenting to hospital with both mild and severe respiratory illnesses as well as age-matched control children who were well and sampled from home.
HostingRepository	MassIVE
AnnounceDate	2019-06-02
AnnouncementXML	Submission_2019-06-02_07:08:34.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	James Njunge
SpeciesList	scientific name: Homo sapiens; common name: human; NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-04-04 23:29:04	ID requested
1	2018-04-05 00:59:27	announced
⏵ 2	2019-06-02 07:08:45	announced	Adding publication [PMID31101811] to dataset [MSV000082238]

Publication List

Sande CJ, Njunge JM, Mwongeli Ngoi J, Mutunga MN, Chege T, Gicheru ET, Gardiner EM, Gwela A, Green CA, Drysdale SB, Berkley JA, Nokes DJ, Pollard AJ, Airway response to respiratory syncytial virus has incidental antibacterial effects. Nat Commun, 10(1):2218(2019) [pubmed]

Sande CJ, Njunge JM, Mwongeli Ngoi J, Mutunga MN, Chege T, Gicheru ET, Gardiner EM, Gwela A, Green CA, Drysdale SB, Berkley JA, Nokes DJ, Pollard AJ, Airway response to respiratory syncytial virus has incidental antibacterial effects. Nat Commun, 10(1):2218(2019) [pubmed]

Keyword List

submitter keyword: Respiratory syncytial virus, proteomics, mass spectrometry, naso- and oropharynx, respiratory infections

submitter keyword: Respiratory syncytial virus, proteomics, mass spectrometry, naso- and oropharynx, respiratory infections

Contact List

James M. Njunge
contact affiliation	KEMRI-Wellcome.org
contact email	jnjunge@kemri-wellcome.org
lab head
James Njunge
contact affiliation	KEMRI Wellcome Trust Programme
contact email	jnjunge@kemri-wellcome.org
dataset submitter

Full Dataset Link List

MassIVE dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000082238

MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000082238