PXD009032-4

PXD009032 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Phosphoproteomics of Matrigel-embedded samples
Description	Phosphoproteomics data of Matrigel-embedded HCT116 spheroid, and patient-derived colorecral cancer organoid
HostingRepository	jPOST
AnnounceDate	2019-02-24
AnnouncementXML	Submission_2024-07-16_18:41:16.468.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Yuichi Abe
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	S-carboxamidomethyl-L-cysteine; alpha-amino acetylated residue; L-methionine sulfoxide; O-phospho-L-serine; O-phospho-L-threonine; O4'-phospho-L-tyrosine
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-02-23 23:01:02	ID requested
1	2019-02-23 23:18:13	announced
2	2021-02-04 16:57:17	announced	2021-02-04: Updated FTP location.
3	2022-09-18 02:36:03	announced	2022-09-18: Updated FTP location.
⏵ 4	2024-07-16 18:41:17	announced	2024-07-17: Updated PubMed.

Publication List

Abe Y, Tada A, Isoyama J, Nagayama S, Yao R, Adachi J, Tomonaga T, Improved phosphoproteomic analysis for phosphosignaling and active-kinome profiling in Matrigel-embedded spheroids and patient-derived organoids. Sci Rep, 8(1):11401(2018) [pubmed]

Abe Y, Tada A, Isoyama J, Nagayama S, Yao R, Adachi J, Tomonaga T, Improved phosphoproteomic analysis for phosphosignaling and active-kinome profiling in Matrigel-embedded spheroids and patient-derived organoids. Sci Rep, 8(1):11401(2018) [pubmed]

Keyword List

submitter keyword: Spheroid, Organoid

submitter keyword: Spheroid, Organoid

Contact List

Takashi Tomonaga
lab head
Yuichi Abe
contact affiliation	Gifu University
dataset submitter

Full Dataset Link List

jPOST dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST000396/

jPOST dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST000396/