PXD008937 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Impact of CD74 knockdown on the HLA peptidome of the H1 melanoma cell line |
Description | The influence of CD74 expression on the HLA peptidome of the H1 melanoma cell line was analyzed by label-free quantitation mass spectrometry of HLA ligand extracts obtained from CD74 siRNA & control siRNA treated cells. |
HostingRepository | PRIDE |
AnnounceDate | 2018-03-01 |
AnnouncementXML | Submission_2018-03-07_23:58:54.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Daniel Kowalewski |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | No PTMs are included in the dataset |
Instrument | Orbitrap Fusion Lumos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2018-02-13 01:20:24 | ID requested | |
1 | 2018-03-01 06:06:20 | announced | |
⏵ 2 | 2018-03-07 23:58:55 | announced | Updated publication reference for PubMed record(s): 29490700. |
Publication List
Zeiner PS, Zinke J, Kowalewski DJ, Bernatz S, Tichy J, Ronellenfitsch MW, Thorsen F, Berger A, Forster MT, Muller A, Steinbach JP, Beschorner R, Wischhusen J, Kvasnicka HM, Plate KH, Stefanovi, ć S, Weide B, Mittelbronn M, Harter PN, CD74 regulates complexity of tumor cell HLA class II peptidome in brain metastasis and is a positive prognostic marker for patient survival. Acta Neuropathol Commun, 6(1):18(2018) [pubmed] |
Keyword List
curator keyword: Biomedical |
submitter keyword: HLA peptidome, CD74, melanoma |
Contact List
Stefan Stevanovic |
contact affiliation | University of Tübingen Interfaculty Institute for Cell Biology Department of Immunology |
contact email | stefan.stevanovic@uni-tuebingen.de |
lab head | |
Daniel Kowalewski |
contact affiliation | University of Tuebingen, Department of Immunology |
contact email | dercove@gmail.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/03/PXD008937 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD008937
- Label: PRIDE project
- Name: Impact of CD74 knockdown on the HLA peptidome of the H1 melanoma cell line