PXD008844-1

PXD008844 is an original dataset announced via ProteomeXchange.

Title	High-resolution spatially-resolved proteome mapping using automated, sacrificial liquid-mediated sample transfer from laser microdissection to nanodroplet sample preparation
Description	Method development for high-resolution spatially-resolved proteome mapping of tissue heterogeneity. Laser microdissection was coupled with nanodroplet sample preparation and ultrasensitive LC-MS.
HostingRepository	PRIDE
AnnounceDate	2018-07-03
AnnouncementXML	Submission_2018-07-03_08:02:48.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD008844
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Matthew Monroe
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	Oxidation; Carbamidomethyl
Instrument	Orbitrap Fusion Lumos

Revision	Datetime	Status	ChangeLog Entry
0	2018-02-03 04:14:23	ID requested
⏵ 1	2018-07-03 08:02:50	announced
2	2024-10-22 03:59:23	announced	2024-10-22: Updated project metadata.

Zhu Y, Dou M, Piehowski PD, Liang Y, Wang F, Chu RK, Chrisler WB, Smith JN, Schwarz KC, Shen Y, Shukla AK, Moore RJ, Smith RD, Qian WJ, Kelly RT, Spatially Resolved Proteome Mapping of Laser Capture Microdissected Tissue with Automated Sample Transfer to Nanodroplets. Mol Cell Proteomics, 17(9):1864-1874(2018) [pubmed]

curator keyword: Technical

submitter keyword: proteomics, nanoPOTS, laser capture microdissection

Ryan T. Kelly
contact affiliation	Pacific Northwest National Laboratory
contact email	ryan.kelly@pnnl.gov
lab head
Matthew Monroe
contact affiliation	Pacific Northwest National Laboratory
contact email	matthew.monroe@pnnl.gov
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/07/PXD008844

PRIDE project URI

• PRIDE
  1. PXD008844
     1. Label: PRIDE project
     2. Name: High-resolution spatially-resolved proteome mapping using automated, sacrificial liquid-mediated sample transfer from laser microdissection to nanodroplet sample preparation