PXD008273 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Workflow for metaproteome characterization in bronchoalveolar lavage fluid (BALF) |
Description | Establish a pipeline for identifying bacterial peptides from human bronchoalveolar lavage fluid samples. |
HostingRepository | PRIDE |
AnnounceDate | 2019-06-24 |
AnnouncementXML | Submission_2019-06-24_06:53:05.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Kevin Viken |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | iTRAQ8plex-116 reporter+balance reagent acylated residue |
Instrument | LTQ Orbitrap Velos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2017-11-23 01:07:59 | ID requested | |
⏵ 1 | 2019-06-24 06:53:06 | announced | |
Publication List
Jagtap PD, Viken KJ, Johnson J, McGowan T, Pendleton KM, Griffin TJ, Hunter RC, Rudney JD, Bhargava M, BAL Fluid Metaproteome in Acute Respiratory Failure. Am J Respir Cell Mol Biol, 59(5):648-652(2018) [pubmed] |
Keyword List
curator keyword: Metaproteomics, Biological |
submitter keyword: BALF, Metaproteome |
Contact List
Maneesh Bhargava |
contact affiliation | Associate Professor of Medicine, Division of Pulmonary, Allergy, Critical Care and Sleep Medicine University of Minnesota |
contact email | bharg005@umn.edu |
lab head | |
Kevin Viken |
contact affiliation | University of Minnesota |
contact email | kviken@umn.edu |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/06/PXD008273 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD008273
- Label: PRIDE project
- Name: Workflow for metaproteome characterization in bronchoalveolar lavage fluid (BALF)