PXD008214 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Host-pathogen dynamics through secretome analysis of stimulated macrophages |
Description | The Toll-like receptors (TLRs) recognize different pathogen associated molecular patterns (PAMPs) and promote MyD88 dependent and independent responses. Previously, we have reported the discovery of the temporal changes in signaling cascades of macrophage proteome and secretome post-stimulation with different PAMPs. Here we present strategies to profile the secretome of TLR2-, TLR4, and TLR7- stimulated macrophages using whole pathogens were developed. Stable isotope labeling with amino acids in cell culture of macrophages was integrated with whole pathogen macrophage stimulation and subsequent targeted proteomics to quantify cytokines, chemokines, and transcription factors. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_05:34:12.824.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Aleksandra Nita-Lazar |
SpeciesList | scientific name: Mus musculus (Mouse); NCBI TaxID: 10090; |
ModificationList | iodoacetamide derivatized residue |
Instrument | LTQ Orbitrap Velos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2017-11-15 01:23:20 | ID requested | |
1 | 2022-02-28 03:52:38 | announced | |
⏵ 2 | 2024-10-22 05:34:13 | announced | 2024-10-22: Updated project metadata. |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: TLR4, macrophage, TLR2, TLR7,Secretome, targeted proteomics, LC-MS/MS |
Contact List
Aleksandra Nita-Lazar |
contact affiliation | Investigator Chief, Cellular Networks Proteomics Unit Laboratory of Immune System Biology National Institute of Allergy and Infectious Diseases National Institutes of Health Bldg. 4 Rm. 101 4 Memorial Dr Bethesda MD 20892-1892 |
contact email | nitalazarau@niaid.nih.gov |
lab head | |
Aleksandra Nita-Lazar |
contact affiliation | NIAID |
contact email | nitalazarau@niaid.nih.gov |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/02/PXD008214 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD008214
- Label: PRIDE project
- Name: Host-pathogen dynamics through secretome analysis of stimulated macrophages