⮝ Full datasets listing
PXD007980-1
PXD007980 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Echis carinatus carinatus (India) venom proteomics |
| Description | In order to study the proteome of Echis carinatus carinatus venom of Indian origin, crude venom was fractionated on a Shodex KW-803 gel filtration column coupled to Dionex Ultimate 3000 UHPLC system. The resulting peaks were pooled and subjected to in-solution trypsin digestion and subsequent tandem mass spectrometry analysis. The raw data were then analysed using PEAKS 8.5 software to finally decipher the complex venom proteome. |
| HostingRepository | PRIDE |
| AnnounceDate | 2017-12-15 |
| AnnouncementXML | Submission_2017-12-15_00:48:51.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Aparup Patra |
| SpeciesList | scientific name: Echis carinatus; NCBI TaxID: 40353; |
| ModificationList | monohydroxylated residue; iodoacetamide derivatized residue; deamidated residue |
| Instrument | LTQ Orbitrap Elite |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2017-10-17 05:50:23 | ID requested | |
| ⏵ 1 | 2017-12-15 00:48:53 | announced | |
| 2 | 2024-10-22 04:16:10 | announced | 2024-10-22: Updated project metadata. |
Publication List
Keyword List
| curator keyword: Biological |
| submitter keyword: snake venom, LC-MS/MS, shotgun proteomics |
Contact List
| Dr. Ashis Kumar Mukherjee | |
|---|---|
| contact affiliation | Professor, Department of Molecular Biology and Biotechnology, Tezpur University, Tezpur, India |
| contact email | ashmukh@yahoo.co.uk |
| lab head | |
| Aparup Patra | |
| contact affiliation | Research Scholar |
| contact email | aparup@tezu.ernet.in |
| dataset submitter | |
Full Dataset Link List
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/12/PXD007980 |
| PRIDE project URI |
Repository Record List
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