PXD007973-2

PXD007973 is an original dataset announced via ProteomeXchange.

Title	Moss proteomes, LC-MS/MS - proteome data analysis
Description	Short (<100 codons) open reading frames (sORFs) are common features of all genomes. Proof of translation of sORFs is an important step towards finding of functional sORF-encoded peptides (SEPs). We verified translation of our predicted sORFs using mass-spectrometry (MS) analysis which is often considered as the gold standard in detection of proteins or peptides in cell.
HostingRepository	PRIDE
AnnounceDate	2020-03-12
AnnouncementXML	Submission_2020-03-12_03:42:37.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Igor Fesenko
SpeciesList	scientific name: Physcomitrella patens subsp. patens (Moss); NCBI TaxID: 3218;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2017-10-16 05:48:08	ID requested
1	2019-08-08 03:11:04	announced
⏵ 2	2020-03-12 03:42:40	announced	2020-03-12: Updated project metadata.
3	2023-11-14 08:49:30	announced	2023-11-14: Updated project metadata.

10.1101/gr.253302.119;

curator keyword: Biological

submitter keyword: moss tissue

Vadim M Govorun
contact affiliation	IBCH RAS
contact email	fesigor@gmail.com
lab head
Igor Fesenko
contact affiliation	IBCH RAS
contact email	fesigor@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/08/PXD007973

PRIDE project URI

• PRIDE
  1. PXD007973
     1. Label: PRIDE project
     2. Name: Moss proteomes, LC-MS/MS - proteome data analysis