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PXD007802-3

PXD007802 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleMaize root LC-MSMS, part 2 - Comparative proteomics of contrasting maize genotypes provides insights into salt-stress tolerance mechanisms
DescriptionSalt stress is one major abiotic stress limiting maize grain yield throughout the world.To better understand maize salt tolerance molecular mechanism, comparative proteomic analysis was conducted on seedling roots of salt-tolerant genotype Jing724 and salt-sensitive genotype D9H under NaCl. Jing724 exhibited significantly higher germination rate and growth parameters (weight/length) than did D9H under salt treatment.We identified 565 differentially regulated proteins (DRP) using iTRAQ and 89 were specific to Jing724 while 424 were specific to D9H. In salt stressed Jing724, pentose phosphate pathway, glutathione metabolism and nitrogen metabolism were enriched. By pathway enrichment and protein-protein interaction analyses, key DRPs such as glucose-6-phosphate 1-dehydrogenase, NADPH producing dehydrogenase, glutamate synthase and glutamine synthasewere identified.Additionally, salt responsive proteins of Jing724 were indicated to facilitate energy management, maintenance of redox homeostasis, reducing ammonia toxicity, osmotic homeostasis regulation, stress defense, stress adaptation, biotic cross-tolerance and gene transcription regulation. Quantification of multiple metabolic or enzymatic changes including SOD activity, MDA content, relative electrolyte leakage and Proline content were consistent with their predicted changes based on functions of DRPs. DRP analysis was correlated with the mRNA transcripts abundancevariation of eight representative DRPs. These results contribute to elucidating molecular networks of salt tolerance.
HostingRepositoryPRIDE
AnnounceDate2024-10-22
AnnouncementXMLSubmission_2024-10-22_04:40:20.399.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterMeijie Luo
SpeciesList scientific name: Zea mays (Maize); NCBI TaxID: 4577;
ModificationListiTRAQ8plex-116 reporter+balance reagent acylated residue; iodoacetamide derivatized residue
InstrumentOrbitrap Fusion
Dataset History
RevisionDatetimeStatusChangeLog Entry
02017-09-20 08:43:08ID requested
12017-12-04 23:32:28announced
22017-12-11 04:08:09announcedUpdated publication reference for PubMed record(s): 29192500.
32024-10-22 04:40:25announced2024-10-22: Updated project metadata.
Publication List
Luo M, Zhao Y, Wang Y, Shi Z, Zhang P, Zhang Y, Song W, Zhao J, Comparative Proteomics of Contrasting Maize Genotypes Provides Insights into Salt-Stress Tolerance Mechanisms. J Proteome Res, 17(1):141-153(2018) [pubmed]
10.1021/acs.jproteome.7b00455;
Keyword List
curator keyword: Biological
submitter keyword: seedling root,iTRAQ, salt tolerance,maize, comparative proteomic analysis
Contact List
Jiuran Zhao
contact affiliationBeijing Key Laboratory of Maize DNA Fingerprinting and Molecular Breeding, Maize Research Center, Beijing Academy of Agriculture and Forestry Sciences (BAAFS), Beijing, 100097, China
contact emailmaizezhao@126.com
lab head
Meijie Luo
contact affiliationBeijing Key Laboratory of Maize DNA Fingerprinting and Molecular Breeding, Maize Research Center, Beijing Academy of Agriculture and Forestry Sciences (BAAFS), Beijing, 100097, China
contact emailmjluo108@163.com
dataset submitter
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PRIDE project URI
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