PXD007541-1
PXD007541 is an original dataset announced via ProteomeXchange.
Dataset Summary
Title | Characterization of indole-3-acetic acid biosynthesis and the effects of IAA exposure on the proteome of the plant-associated microbe Pantoea sp. YR343 |
Description | Pantoea sp. YR343, isolated from the Populus deltoides rhizosphere, is a robust plant root colonizer that produces indole-3-acetic acid (IAA). Genomic and metabolomic analyses predicted that Pantoea sp. YR343 synthesizes IAA primarily using the indole-3-pyruvate pathway. Pantoea sp. YR343 proteomes showed upregulation of IpdC for growth in the presence of tryptophan or IAA versus controls. |
HostingRepository | MassIVE |
AnnounceDate | 2018-02-20 |
AnnouncementXML | Submission_2018-02-20_07:52:23.xml |
DigitalObjectIdentifier | |
ReviewLevel | Non peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Greg Hurst |
SpeciesList | scientific name: Pantoea sp. YR343; NCBI TaxID: 1144341; |
ModificationList | S-carboxamidomethyl-L-cysteine |
Instrument | LTQ XL |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
---|---|---|---|
0 | 2017-08-23 15:26:40 | ID requested | |
⏵ 1 | 2018-02-20 07:52:24 | announced |
Publication List
no publication |
Keyword List
submitter keyword: Pantoea, tryptophan, indole-3-acetic acid, plant-microbe interaction, rhizosphere |
Contact List
Jennifer L. Morrell-Falvey | |
---|---|
contact affiliation | Oak Ridge National Laboratory |
contact email | morrelljl1@ornl.gov |
lab head | |
Greg Hurst | |
contact affiliation | Oak Ridge National Laboratory |
contact email | hurstgb@ornl.gov |
dataset submitter |
Full Dataset Link List
MassIVE dataset URI |
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000081478 |