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PXD007517 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleXylem sap shotgun proteomics from Fe- and Mn-deficient and Mn-toxic tomato plants
DescriptionThe aim of this work was to study the effects of Fe and Mn deficiencies and Mn toxicity on the protein profile of the xylem sap of tomato (Solanum lycopersicum), with the aim of elucidating plant response mechanisms to these nutritional stresses. Tomato was chosen as a model plant because the tomato genome has been published and this plant species has adequate root pressure and turgid stems that permit xylem sap sampling in sufficient amounts by de-topping. The high-throughput shotgun analysis has permitted to identify and quantitate a large number of low abundance proteins in the tomato xylem sap.
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterLaura Ceballos-Laita
SpeciesList scientific name: Viridiplantae; NCBI TaxID: 33090;
ModificationListmonohydroxylated residue; iodoacetamide derivatized residue
InstrumentLTQ Orbitrap XL
Dataset History
RevisionDatetimeStatusChangeLog Entry
02017-08-18 04:11:42ID requested
12017-11-29 19:21:12announced
Publication List
Ceballos-Laita L, Gutierrez-Carbonell E, Takahashi D, Abad, í, a A, Uemura M, Abad, í, a J, L, ó, pez-Mill, á, n AF, Effects of Fe and Mn deficiencies on the protein profiles of tomato (Solanum lycopersicum) xylem sap as revealed by shotgun analyses. J Proteomics, 170():117-129(2018) [pubmed]
Keyword List
curator keyword: Biological
submitter keyword: Iron deficiency
Mn deficiency
Mn toxicity
Shotgun proteomics
Xylem sap
Contact List
Laura Ceballos-Laita
contact affiliationPlant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. 13034, 50080 Zaragoza, Spain
contact emaillceballos@eead.csic.es
lab head
Laura Ceballos-Laita
contact affiliationExperimental Station Aula Dei-CSIC
contact emaillceballos@eead.csic.es
dataset submitter
Full Dataset Link List
Dataset FTP location
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