PXD007213-1

PXD007213 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Defining Host Responses During Systemic Bacterial Infection Through Construction of a Murine Organ Proteome Atlas
Description	Quantitative proteomic analysis from organs of mice either mock-infected or infected with group a streptococcus. Proteomic analysis was performed on an Orbitrap fusion with TMT based quantification using an SPS MS3 method to reduce interference effects.
HostingRepository	MassIVE
AnnounceDate	2018-03-09
AnnouncementXML	Submission_2018-03-09_08:05:01.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	John Lapek
SpeciesList	scientific name: Mus musculus; common name: house mouse; NCBI TaxID: 10090; scientific name: Streptococcus pyogenes; NCBI TaxID: 1314;
ModificationList	TMT6plex; Oxidation; Carbamidomethyl
Instrument	Orbitrap Fusion

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2017-08-07 18:28:34	ID requested
⏵ 1	2018-03-09 08:05:01	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: quantitative multiplexed proteomics, systemic infection, Group A Streptococcus, Orbitrap Fusion, Tandem Mass Tags, mass spectrometry

submitter keyword: quantitative multiplexed proteomics, systemic infection, Group A Streptococcus, Orbitrap Fusion, Tandem Mass Tags, mass spectrometry

Contact List

David Gonzalez
contact affiliation	UCSD
contact email	djgonzalez@ucsd.edu
lab head
John Lapek
contact affiliation	UCSD
contact email	jlapek@ucsd.edu
dataset submitter

Full Dataset Link List

MassIVE dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000081425

MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000081425