PXD007190-2

PXD007190 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	SWATH-MS proteomic analysis of nitrogen deficiency response of Arabidopsis
Description	Protein profiling of Arabidopsis thaliana seedling under nitrogen depreciation. Seven days old seedlings of Aradidopsis thaliana were transferred to nitrogen depreciated MS medium for further 48 hours cultivation. Same number of seedlings received same treatment except using MS medium were acted as control. After treatment, whole seedlings were extracted for protein profiling study.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:21:00.977.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Wai Lung Chan
SpeciesList	scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702;
ModificationList	No PTMs are included in the dataset
Instrument	TripleTOF 5600

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2017-08-04 04:24:38	ID requested
1	2018-11-21 09:06:26	announced
⏵ 2	2024-10-22 04:21:01	announced	2024-10-22: Updated project metadata.

Publication List

Zhu FY, Chen MX, Chan WL, Yang F, Tian Y, Song T, Xie LJ, Zhou Y, Xiao S, Zhang J, Lo C, SWATH-MS quantitative proteomic investigation of nitrogen starvation in Arabidopsis reveals new aspects of plant nitrogen stress responses. J Proteomics, 187():161-170(2018) [pubmed]
10.1016/j.jprot.2018.07.014;

Zhu FY, Chen MX, Chan WL, Yang F, Tian Y, Song T, Xie LJ, Zhou Y, Xiao S, Zhang J, Lo C, SWATH-MS quantitative proteomic investigation of nitrogen starvation in Arabidopsis reveals new aspects of plant nitrogen stress responses. J Proteomics, 187():161-170(2018) [pubmed]

10.1016/j.jprot.2018.07.014;

Keyword List

curator keyword: Biological
submitter keyword: Arabidopsis thaliana, SWATH, whole

curator keyword: Biological

submitter keyword: Arabidopsis thaliana, SWATH, whole

Contact List

Wai-Lung Chan
contact affiliation	School of Biological Sciences, The University of Hong Kong
contact email	wwailungchan@gmail.com
lab head
Wai Lung Chan
contact affiliation	The University of Hong Kong
contact email	wwailungchan@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/11/PXD007190
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/11/PXD007190

PRIDE project URI

Repository Record List

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