PXD007098 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Fragilariopsis Cylindrus dark survival experiment |
Description | The sea-ice dwelling diatom Fragilariopsis Cylindrus was cultured for 4 months under dark or light exposed conditions to mimic the effects of Antarctic winter growth conditions. Cells were harvested periodically and LFQ proteomics used to investigate the molecular mechanisms of dark survival. |
HostingRepository | PRIDE |
AnnounceDate | 2019-04-23 |
AnnouncementXML | Submission_2019-04-23_05:19:47.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Richard Wilson |
SpeciesList | scientific name: Fragilariopsis cylindrus; NCBI TaxID: 186039; |
ModificationList | monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | LTQ Orbitrap |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2017-07-21 06:26:40 | ID requested | |
⏵ 1 | 2019-04-23 05:19:48 | announced | |
Publication List
Kennedy F, Martin A, Bowman JP, Wilson R, McMinn A, Dark metabolism: a molecular insight into how the Antarctic sea-ice diatom Fragilariopsis cylindrus survives long-term darkness. New Phytol, 223(2):675-691(2019) [pubmed] |
Keyword List
curator keyword: Biological |
submitter keyword: Sea-ice diatom, dark survival, quantitative proteomics |
Contact List
Dr Richard Wilson |
contact affiliation | Proteomics mass spectrometry core facility, Central Science Laboratory, University of Tasmania, Australia |
contact email | richard.wilson@utas.edu.au |
lab head | |
Richard Wilson |
contact affiliation | University of Tasmania |
contact email | richard.wilson@utas.edu.au |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/04/PXD007098 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD007098
- Label: PRIDE project
- Name: Fragilariopsis Cylindrus dark survival experiment