PXD006768-1

PXD006768 is an original dataset announced via ProteomeXchange.

Title	The Study of ATRA-Induced Differentiation of the HL-60 Cell Line
Description	Shotgun mass-spectrometric experiment was performed with HL-60 cells induced to differentiation at 0, 3, 24, 48 and 96h after ATRA treatment. Obtained data has been used for label-free quantification by SPIRE platform based on spectral count. Results on proteome profiling were used for up-stream regulator search in geneXplain platform (http://genexplain.com/).
HostingRepository	PRIDE
AnnounceDate	2021-09-07
AnnouncementXML	Submission_2021-09-07_03:41:56.906.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Svetlana Novikova
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2017-06-21 02:22:23	ID requested
⏵ 1	2021-09-07 03:41:57	announced

Novikova S, Tikhonova O, Kurbatov L, Farafonova T, Vakhrushev I, Lupatov A, Yarygin K, Zgoda V, Omics Technologies to Decipher Regulatory Networks in Granulocytic Cell Differentiation. Biomolecules, 11(6):(2021) [pubmed]

curator keyword: Biomedical

submitter keyword: HL60 cell line, ATRA, differentiation, proteomics, time-course study

Victor Zgoda
contact affiliation	Department of Proteomic Research and Mass Spectrometry, Laboratory of Systems Biology, IBMC, Moscow, Russia
contact email	victor.zgoda@gmail.com
lab head
Svetlana Novikova
contact affiliation	institute of biomedical chemistry Moscow
contact email	novikova.s.e3101@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/09/PXD006768

PRIDE project URI

• PRIDE
  1. PXD006768
     1. Label: PRIDE project
     2. Name: The Study of ATRA-Induced Differentiation of the HL-60 Cell Line