<<< Full experiment listing


PXD006697 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleSynthesizing Signaling Pathways from Temporal Phosphoproteomic Data
DescriptionA quantitative time series of EGFR signaling was acquired using mass spectrometry-based phosphoproteomics to develop an algorithm that identifies signaling pathway structures. The study used Flp-In 293 cells expressing EGFR that were stimulated with EGF.
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterAnthony Gitter
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListphosphorylated residue
InstrumentLTQ Orbitrap Velos
Dataset History
RevisionDatetimeStatusChangeLog Entry
02017-06-12 01:20:45ID requested
12018-09-18 07:19:05announced
22018-10-04 08:57:48announcedUpdated publication reference for PubMed record(s): 30257219.
Publication List
K, ö, ksal AS, Beck K, Cronin DR, McKenna A, Camp ND, Srivastava S, MacGilvray ME, Bod, í, k R, Wolf-Yadlin A, Fraenkel E, Fisher J, Gitter A, Synthesizing Signaling Pathways from Temporal Phosphoproteomic Data. Cell Rep, 24(13):3607-3618(2018) [pubmed]
Keyword List
curator keyword: Biological
submitter keyword: HEK-293, phosphorylation, time series, EGFR, Temporal Pathway Synthesizer
Contact List
Anthony Gitter
contact affiliationUniversity of Wisconsin-Madison, Madison, WI, United States
contact emailgitter@biostat.wisc.edu
lab head
Anthony Gitter
contact affiliationUniversity of Wisconsin-Madison
contact emailgitter@biostat.wisc.edu
dataset submitter
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/09/PXD006697
PRIDE project URI
Repository Record List
[ + ]