PXD006489 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Proteogenomic Re-annotation of Coccidioides posadasii strain Silveira |
Description | The aims of this study were to present modifications to the annotations of the genome of C. posadasii, one of two closely related species of Coccidioides, a dimorphic fungal pathogen that causes coccidioidomycosis, also called Valley Fever. Proteins present in lysates and filtrates of in vitro grown mycelia and parasitic phase spherules from C. posadasii strain Silveira were analyzed using a GeLC-MS/MS method. |
HostingRepository | PRIDE |
AnnounceDate | 2017-11-08 |
AnnouncementXML | Submission_2017-11-20_05:52:50.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Natalie Mitchell |
SpeciesList | scientific name: Coccidioides posadasii str. Silveira; NCBI TaxID: 443226; |
ModificationList | monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2017-05-11 00:45:45 | ID requested | |
1 | 2017-11-07 23:59:57 | announced | |
⏵ 2 | 2017-11-20 05:52:52 | announced | Updated publication reference for PubMed record(s): 29130603. |
Publication List
Mitchell NM, Sherrard AL, Dasari S, Magee DM, Grys TE, Lake DF, Proteogenomic Re-Annotation of Coccidioides posadasii Strain Silveira. Proteomics, 18(1):(2018) [pubmed] |
Keyword List
curator keyword: Biological, Biomedical |
submitter keyword: Coccidioides, coccidioidomycosis, genomics, proteogenomics, Valley Fever |
Contact List
Douglas F Lake |
contact affiliation | PI and Professor |
contact email | douglas.lake@asu.edu |
lab head | |
Natalie Mitchell |
contact affiliation | PhD Student |
contact email | nmitche3@asu.edu |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/11/PXD006489 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD006489
- Label: PRIDE project
- Name: Proteogenomic Re-annotation of Coccidioides posadasii strain Silveira