PXD006444-2

PXD006444 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteomic response of Bacillus subtilis 3610 to nanoparticles exposition
Description	The natural biotope of Bacillus subtilis is the upper layer of soil where it grows as a biofilm. To mimic this physiological development and study the impact of nanoparticles during the formation of a biofilm in a contaminated soil, we have studied the proteomic response of the ancestral strain Bacillus subtilis 3610, which is able to form biofilm contrary to the 168 laboratory strain. The bacteria were grown on soft agar plates containing n-ZnO, n-TiO2 or ZnSO4 metal ion.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:32:36.629.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Thierry Rabilloud
SpeciesList	scientific name: Bacillus subtilis; NCBI TaxID: 1423;
ModificationList	monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Velos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2017-05-03 07:51:28	ID requested
1	2018-10-24 13:41:27	announced
⏵ 2	2024-10-22 04:32:43	announced	2024-10-22: Updated project metadata.

Publication List

10.1038/s41598-018-21402-0;
Eymard-Vernain E, Luche S, Rabilloud T, Lelong C, Impact of nanoparticles on the Bacillus subtilis (3610) competence. Sci Rep, 8(1):2978(2018) [pubmed]

10.1038/s41598-018-21402-0;

Eymard-Vernain E, Luche S, Rabilloud T, Lelong C, Impact of nanoparticles on the Bacillus subtilis (3610) competence. Sci Rep, 8(1):2978(2018) [pubmed]

Keyword List

curator keyword: Biomedical
submitter keyword: Bacillus subtilis 3610, label-free proteomics, nanoparticles

curator keyword: Biomedical

submitter keyword: Bacillus subtilis 3610, label-free proteomics, nanoparticles

Contact List

Rabilloud
contact affiliation	CNRS
contact email	thierry.rabilloud@cea.fr
lab head
Thierry Rabilloud
contact affiliation	CNRS
contact email	thierry.rabilloud@cea.fr
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/10/PXD006444
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/10/PXD006444

PRIDE project URI

Repository Record List

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