PXD006119-1

PXD006119 is an original dataset announced via ProteomeXchange.

Title	Human WIPI interactome (LC-MSMS)
Description	Analysis of the WIPI protein interactome using nanoLC-MS/MS analysis upon the immunopurification of GFP-tagged WIPI1, WIPI2B, WIPI2D, WIPI3, WIPI4 and GFP alone from U2OS cells. Prior to immunopurifications, cells were either kept under fed (DMEM/FCS) or starved conditions (EBSS), or were treated with wortmannin (200 nM) for 3 h.
HostingRepository	PRIDE
AnnounceDate	2017-06-01
AnnouncementXML	Submission_2017-06-01_09:06:02.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Nicolas Nalpas
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	LTQ Orbitrap XL

Revision	Datetime	Status	ChangeLog Entry
0	2017-03-20 03:13:45	ID requested
⏵ 1	2017-06-01 09:06:04	announced
2	2024-10-22 04:04:46	announced	2024-10-22: Updated project metadata.

Bakula D, M, ü, ller AJ, Zuleger T, Takacs Z, Franz-Wachtel M, Thost AK, Brigger D, Tschan MP, Frickey T, Robenek H, Macek B, Proikas-Cezanne T, -propellers are scaffolds for LKB1-AMPK-TSC signalling circuits in the control of autophagy. Nat Commun, 8():15637(2017) [pubmed]

curator keyword: Biological, Biomedical

submitter keyword: WIPI1, WIPI2, WIPI3, WIPI4, autophagy, LC-MSMS

Tassula Proikas-Cezanne
contact affiliation	Eberhard Karls University Tübingen Faculty of Science Interfaculty Institute of Cell Biology Department of Molecular Biology Auf der Morgenstelle 15 72076 Tübingen Germany
contact email	tassula.proikas-cezanne@uni-tuebingen.de
lab head
Nicolas Nalpas
contact affiliation	Tuebingen University
contact email	nalpas.nicolas@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/06/PXD006119

PRIDE project URI

• PRIDE
  1. PXD006119
     1. Label: PRIDE project
     2. Name: Human WIPI interactome (LC-MSMS)