PXD006075-1

PXD006075 is an original dataset announced via ProteomeXchange.

Title	Salt stress induces changes in the proteomic profile of micropropagated sugarcane shoots
Description	Salt stress is one of the most common stresses in agricultural regions worldwide. In particular, sugarcane is affected by these conditions and there are still no cultivars that show high productivity allied with a tolerance to salt stress. Proteomic analysis is an important tool for elucidating important pathways involved in the response to various abiotic stresses at the biochemical and molecular levels. Thus, the aim of this study was to analyse the proteomic effects of salt stress in the micropropagated shoots of two sugarcane cultivars (CB38-22 and RB855536) using a label-free proteomic approach. Cultivar RB855536 is more tolerant to salt stress than is CB38-22.
HostingRepository	PRIDE
AnnounceDate	2017-04-26
AnnouncementXML	Submission_2017-04-26_04:37:39.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Vanildo Silveira
SpeciesList	scientific name: Saccharum sp.; NCBI TaxID: 15819;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Synapt MS

Revision	Datetime	Status	ChangeLog Entry
0	2017-03-13 02:17:09	ID requested
⏵ 1	2017-04-26 04:37:40	announced
2	2024-10-22 04:08:50	announced	2024-10-22: Updated project metadata.

Passamani LZ, Barbosa RR, Reis RS, Heringer AS, Rangel PL, Santa-Catarina C, Grativol C, Veiga CFM, Souza-Filho GA, Silveira V, Salt stress induces changes in the proteomic profile of micropropagated sugarcane shoots. PLoS One, 12(4):e0176076(2017) [pubmed]

curator keyword: Biological

submitter keyword: Saccharum spp.

Sugarcane

Comparative proteomics, NaCl-induced stress

Abiotic stress.

Vanildo Silveira
contact affiliation	Laboratório de Biotecnologia,Unidade de Biologia Integrativa, Setor de Genômica e Proteômica. Centro de Biociências e Biotecnologia (CBB). Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF). Av. Alberto Lamego, 2000, Campos dos Goytacazes, RJ, 28013-602, Brazil.
contact email	vanildo@uenf.br
lab head
Vanildo Silveira
contact affiliation	UNIVERSIDADE ESTADUAL DO NORTE FLUMINENSE
contact email	vanildo@uenf.br
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/04/PXD006075

PRIDE project URI

• PRIDE
  1. PXD006075
     1. Label: PRIDE project
     2. Name: Salt stress induces changes in the proteomic profile of micropropagated sugarcane shoots