PXD005777-1

PXD005777 is an original dataset announced via ProteomeXchange.

Title	Quantitative proteome analysis of plasma microparticles for characterization of HCV-induced hepatic cirrhosis and hepatocellular carcinoma
Description	A quantitative label-free proteome analysis was performed using plasma samples from 22 hepatitis-C virus (HCV)-induced liver cirrhosis patients, 16 HCV-positive hepatocellular carcinoma patients with underlying cirrhosis and 18 healthy controls. Plasma microparticles (PMPS) were isolated using ultracentrifugation and analyzed via label-free LC-MS/MS. A quantitative label-free proteome analysis was performed using plasma samples from 22 hepatitis-C virus (HCV)-induced liver cirrhosis patients, 16 HCV-positive hepatocellular carcinoma patients with underlying cirrhosis and 18 healthy controls. Plasma microparticles (PMPS) were isolated using ultracentrifugation and analyzed via label-free LC-MS/MS.
HostingRepository	PRIDE
AnnounceDate	2017-06-21
AnnouncementXML	Submission_2017-06-21_00:28:03.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD005777
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Thilo Bracht
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	residues isobaric at 128.058578 Da; Oxidation; Carbamidomethyl
Instrument	LTQ Orbitrap Elite

Revision	Datetime	Status	ChangeLog Entry
0	2017-01-24 07:21:15	ID requested
⏵ 1	2017-06-21 00:28:04	announced
2	2024-10-22 04:35:52	announced	2024-10-22: Updated project metadata.

Taleb RSZ, Moez P, Younan D, Eisenacher M, Tenbusch M, Sitek B, Bracht T, Quantitative proteome analysis of plasma microparticles for the characterization of HCV-induced hepatic cirrhosis and hepatocellular carcinoma. Proteomics Clin Appl, 11(11-12):(2017) [pubmed]

curator keyword: Biomedical

submitter keyword: hepatocellular carcinoma, liver cirrhosis, hepatitis C virus, plasma microparticles, label-free proteomics

Barbara Sitek
contact affiliation	Clinical Proteomics, Medizinisches Proteom-Center, Ruhr-Universität Bochum, Universitätsstraße 150, 44801, Bochum,Germany
contact email	barbara.sitek@rub.de
lab head
Thilo Bracht
contact affiliation	Clinical Proteomics
contact email	thilo.bracht@rub.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/06/PXD005777

PRIDE project URI

• PRIDE
  1. PXD005777
     1. Label: PRIDE project
     2. Name: Quantitative proteome analysis of plasma microparticles for characterization of HCV-induced hepatic cirrhosis and hepatocellular carcinoma