PXD005745-4

PXD005745 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Quantitative proteomics shows extensive remodelling induced by N limitation in Prochlorococcus sp. SS120 C4PR_LIV
Description	Prochlorococcus is the most abundant photosynthetic organism on Earth, contributing significantly to the global primary production and playing a prominent role in biogeochemical cycles. Prochlorococcus requires the capability to accommodate to environmental changes in order to proliferate in oligotrophic oceans, in particular regarding nitrogen availability. A precise knowledge of the composition and changes of the proteome is necessary to gain fundamental insights into such response. Here we study the effects of extreme nitrogen limitation, a feature of the oligotrophic oceans inhabited by this organism.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:35:43.410.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD005745
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Guadalupe Gomez Baena
SpeciesList	scientific name: Prochlorococcus marinus subsp. marinus str. CCMP1375; NCBI TaxID: 167539;
ModificationList	Oxidation; Carbamidomethyl
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2017-01-20 01:51:15	ID requested
1	2017-05-03 06:29:13	announced
2	2017-06-09 05:13:34	announced	Updated publication reference for PubMed record(s): 28593196.
3	2019-08-06 00:30:22	announced	Updated project metadata.
⏵ 4	2024-10-22 04:35:49	announced	2024-10-22: Updated project metadata.

Publication List

Dom, í, nguez-Mart, í, n MA, G, ó, mez-Baena G, D, í, ez J, L, ó, pez-Grueso MJ, Beynon RJ, Garc, í, a-Fern, á, ndez JM, SS120. mSystems, 2(3):(2017) [pubmed]
10.1128/mSystems.00008-17;
10.6019/PXD005745;

Dom, í, nguez-Mart, í, n MA, G, ó, mez-Baena G, D, í, ez J, L, ó, pez-Grueso MJ, Beynon RJ, Garc, í, a-Fern, á, ndez JM, SS120. mSystems, 2(3):(2017) [pubmed]

10.1128/mSystems.00008-17;

10.6019/PXD005745;

Keyword List

curator keyword: Biological
submitter keyword: Prochlorococcus, N metabolism, C metabolism

curator keyword: Biological

submitter keyword: Prochlorococcus, N metabolism, C metabolism

Contact List

Robert J. Beynon
contact affiliation	Centre for Proteome Research, Institute of Integrative Biology, University of Liverpool
contact email	r.beynon@liv.ac.uk
lab head
Guadalupe Gomez Baena
contact affiliation	University of Liverpool
contact email	g.gomez-baena@liverpool.ac.uk
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/05/PXD005745
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/05/PXD005745

PRIDE project URI

Repository Record List

[ + ]