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PXD005608-1

PXD005608 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleQuantitative proteomic profiling of the extracellular matrix of pancreatic islets during the angiogenic switch and insulinoma progression
DescriptionNaba A, Clauser KR, Mani DR, Carr SA, Hynes RO. The angiogenic switch, the time at which a tumor becomes vascularized, is a critical step in tumor progression. Indeed, it has been demonstrated that without blood supply, tumors will fail to grow beyond 1mm3 and are unlikely to disseminate. The extracellular matrix (ECM), a major component of the tumor microenvironment, is known to undergo significant changes during tumor progression and, in particular, during angiogenesis. However the extent of these changes remains unknown. In this study, we used quantitative proteomics to characterize the composition of the ECM of pancreatic islets in a transgenic mouse model of insulinoma characterized by a precisely timed angiogenic switch. Out of the 120 ECM proteins quantified, 35 were detected in significantly different abundance as pancreatic islets progressed from being hyperplastic to angiogenic to insulinomas. Among these, the core ECM proteins, EFEMP1, Fibrillin 1 and periostin were found in higher abundance, and decorin, Dmbt1, hemicentin and Vwa5 in lower abundance during tumor progression. The angiogenic switch being a common feature of solid tumors, we propose that some of the proteins identified represent potential novel anti-angiogenic targets. In addition, we report here the characterization of the ECM composition of normal pancreatic islets and propose that this could be of interest for the design of tissue engineering and regenerative strategies for treatment of diabetes.
HostingRepositoryMassIVE
AnnounceDate2016-12-20
AnnouncementXMLSubmission_2016-12-20_12:11:25.xml
DigitalObjectIdentifier
ReviewLevelNon peer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterKarl Clauser
SpeciesList scientific name: Mus musculus; common name: house mouse; NCBI TaxID: 10090;
ModificationListunknown modification: K-iTRAQ; unknown modification: P-hydroxyproline; unknown modification: C-carbamidomethyl; unknown modification: Nterm-carbamyl; unknown modification: N-deamidation (PNGaseF)
InstrumentLTQ Orbitrap Elite
Dataset History
RevisionDatetimeStatusChangeLog Entry
02016-12-20 12:11:24ID requested
12016-12-20 12:11:25announced
Publication List
Dataset with its publication pending
Keyword List
submitter keyword: iTRAQ, angiogenesis
Contact List
principal_investigator
lab head
Karl Clauser
contact affiliationBroad Institute of MIT and Harvard
contact emailclauser@broad.mit.edu
dataset submitter
Full Dataset Link List
MassIVE dataset URI
Dataset FTP location
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