PXD005534-2

PXD005534 is an original dataset announced via ProteomeXchange.

Title	Middle Pleistocene protein sequences from the rhinoceros genus Stephanorhinus and the phylogeny of extant and extinct Middle/Late Pleistocene Rhinocerotidae.
Description	Characterization of Middle Pleistocene rhinoceros proteins and the phylogenetic relationships between extinct and extanct rhinoceros was investigated by obtaining ancient protein data for two extinct rhinoceros genera (Coelodonta antiquitatis and Stephanorhinus sp.).
HostingRepository	PRIDE
AnnounceDate	2017-02-02
AnnouncementXML	Submission_2017-03-21_08:31:57.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Frido Welker
SpeciesList	scientific name: Rhinocerotidae; NCBI TaxID: 9803; scientific name: Coelodonta antiquitatis (woolly rhinoceros); NCBI TaxID: 222863;
ModificationList	hydroxylated proline; monohydroxylated residue; deamidated residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2016-12-09 04:14:09	ID requested
1	2017-02-02 00:49:47	announced
⏵ 2	2017-03-21 08:31:58	announced	Updated publication reference for PubMed record(s): 28316883.
3	2024-10-22 04:35:01	announced	2024-10-22: Updated project metadata.

Welker F, Smith GM, Hutson JM, Kindler L, Garcia-Moreno A, Villaluenga A, Turner E, Gaudzinski-Windheuser S, and the phylogeny of extant and extinct Middle/Late Pleistocene Rhinocerotidae. PeerJ, 5():e3033(2017) [pubmed]

curator keyword: Biological

submitter keyword: Ancient proteins, collagen, non-collagenous proteins, Rhinocerotidae

Frido Welker
contact affiliation	Department of Human Evolution, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany
contact email	frido_welker@eva.mpg.de
lab head
Frido Welker
contact affiliation	PhD candidate: Department of Human Evolution, MPI-EVA. Associate Researcher: BioArCh, Department of Archaeology, University of York
contact email	frido.welker@palaeo.eu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/02/PXD005534

PRIDE project URI

• PRIDE
  1. PXD005534
     1. Label: PRIDE project
     2. Name: Middle Pleistocene protein sequences from the rhinoceros genus Stephanorhinus and the phylogeny of extant and extinct Middle/Late Pleistocene Rhinocerotidae.