PXD005425 is an
original dataset announced via ProteomeXchange.
Dataset Summary
| Title | RNF4-knockdown and RNF4-TULIP identified proteins |
| Description | In this project we aim to identify the spacific targets of the SUMO-Targeted Ubiquitin Ligase (STUBL) RNF4. For that, we combine the study of SUMOylation targets that are enriched after RNF4 knockdown with the use of Targeted Ubiquitin Ligases Identified by Proteomics (TULIP). |
| HostingRepository | PRIDE |
| AnnounceDate | 2017-11-23 |
| AnnouncementXML | Submission_2017-12-11_04:19:10.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Román González-Prieto |
| SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
| ModificationList | No PTMs are included in the dataset |
| Instrument | Q Exactive |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|
| 0 | 2016-11-23 01:25:29 | ID requested | |
| 1 | 2017-11-23 01:58:48 | announced | |
| ⏵ 2 | 2017-12-11 04:19:11 | announced | Updated publication reference for PubMed record(s): 29180619. |
| 3 | 2024-10-22 04:41:13 | announced | 2024-10-22: Updated project metadata. |
Publication List
| Kumar R, Gonz, á, lez-Prieto R, Xiao Z, Verlaan-de Vries M, Vertegaal ACO, The STUbL RNF4 regulates protein group SUMOylation by targeting the SUMO conjugation machinery. Nat Commun, 8(1):1809(2017) [pubmed] |
Keyword List
| curator keyword: Biological |
| submitter keyword: SUMO, Ubiquitin, RNF4 |
Contact List
| Alfred CO Vertegaal |
|---|
| contact affiliation | Associate Proffesor Department of Molecular Cell Biology Leiden University Medical Centre Leiden The Netherlands |
| contact email | A.C.O.Vertegaal@lumc.nl |
| lab head | |
| Román González-Prieto |
|---|
| contact affiliation | Leiden University Medical Center (LUMC) |
| contact email | R.Gonzalez_Prieto@lumc.nl |
| dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/11/PXD005425 |
| PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD005425
- Label: PRIDE project
- Name: RNF4-knockdown and RNF4-TULIP identified proteins
to receive all new ProteomeXchange dataset release announcements!
