PXD005173-3

PXD005173 is an original dataset announced via ProteomeXchange.

Title	Phosphoproteomics data of colon tissues (tumor and non-tumor)
Description	Phosphoproteome analyses of colorectal cancer tissues from 20 patients (20 tumors and 20 tumor-adjacent normal tissues) were carried out using IMAC-based posphopeptide enrichment followed by SCX-RP-MS/MS. The obtained results were searched against UniProt DB by Mascot, and the identified peptides were filtered at 1% FDR thresholds by searching against the randomized decoy DB at peptide level. This dataset with the PX complete submission format will be further used to generate a customized DB in this jPOST project.
HostingRepository	jPOST
AnnounceDate	2016-10-18
AnnouncementXML	Submission_2017-03-30_23:39:55.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Mariko Ito
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	iodoacetamide derivatized residue; (2S,3R)-3-hydroxyaspartic acid; L-aspartic 4-phosphoric anhydride
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2016-10-17 07:23:18	ID requested
1	2016-10-17 21:30:19	announced
2	2016-11-17 18:17:01	announced	Updated keyword list.
⏵ 3	2017-03-30 23:39:56	announced	Updated Repository support.
4	2017-03-31 00:20:20	announced	Updated DigitalObjectIdentifier.
5	2018-09-18 23:47:55	announced	Updated CV, FTP location and Modification list.
6	2021-02-04 17:12:16	announced	2021-02-04: Updated FTP location.
7	2022-09-18 02:43:55	announced	2022-09-18: Updated FTP location.

Dataset with its publication pending

submitter keyword: colorectal cancer

FASP

missing protein;

Takeshi Tomonaga
lab head
Mariko Ito
contact affiliation	Kyoto Univ.
dataset submitter

jPOST dataset URI