PXD005111 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Proteome analysis of Jurkat cells for spectral library |
Description | In order to increase the spectral library to study the ocurrence of distinct peptide fragmetation patterns, we analyzed the whole cell proteome of Jurkat cells. |
HostingRepository | PRIDE |
AnnounceDate | 2019-02-25 |
AnnouncementXML | Submission_2019-02-25_01:33:22.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Andreas Schmidt |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue |
Instrument | TripleTOF 6600 |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2016-10-06 23:54:53 | ID requested | |
⏵ 1 | 2019-02-25 01:33:23 | announced | |
2 | 2024-10-22 04:32:51 | announced | 2024-10-22: Updated project metadata. |
Publication List
Ammar C, Berchtold E, Csaba G, Schmidt A, Imhof A, Zimmer R, Multi-Reference Spectral Library Yields Almost Complete Coverage of Heterogeneous LC-MS/MS Data Sets. J Proteome Res, 18(4):1553-1566(2019) [pubmed] |
Keyword List
curator keyword: Technical, Biological |
submitter keyword: spectral library, fragmentation pattern, whole cell lysate |
Contact List
Axel Imhof |
contact affiliation | Protein Analysis Unit ZfP LMU Munich BioMedical Center Grosshaderner Strasse 9 82152 Planegg-Martinsried Tel. +49 89 2180 71804 |
contact email | imhof@lmu.de |
lab head | |
Andreas Schmidt |
contact affiliation | Adolf-Butenandt-Institut |
contact email | A.Schmidt@med.uni-muenchen.de |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/02/PXD005111 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD005111
- Label: PRIDE project
- Name: Proteome analysis of Jurkat cells for spectral library