PXD004426-2

PXD004426 is an original dataset announced via ProteomeXchange.

Title	O-fucosylated glycoproteins of Toxoplasma gondii
Description	The fucose-binding Aleuria aurantia lectin (AAL) labels punctiform structures in proximity to the nuclei of Toxoplasma gondii tachyzoites. We have utilized AAL-lectin affinity purification in conjunction with LC MS/MS to identify a set of proteins modified with fucose on serines and threonines
HostingRepository	PRIDE
AnnounceDate	2016-10-11
AnnouncementXML	Submission_2017-06-12_07:32:23.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD004426
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	John Haserick
SpeciesList	scientific name: Toxoplasma gondii; NCBI TaxID: 5811;
ModificationList	HNE; Ethyl; Ammonia-loss; Amidated; Methyl; AEBS; Hex; Oxidation; ISD_z+2_ion; Ethanolyl; Carboxy; Phospho; Propionamide; Didehydro; Cation:Na; Deamidated; Acetyl; Sulfo; Iodo; HexN; ADP-Ribosyl; Malonyl; Methyl+Deamidated; Carboxymethyl; Formyl; Carbamyl; Lys->Allysine; Farnesyl; Carbamidomethyl; Phosphoadenosine; 3sulfo; Biotin-PEO-Amine; Gln->pyro-Glu; trifluoro; NDA; Guanidinyl; Glu->pyro-Glu; Ammonium; Dehydrated; Biotin; Dimethyl; Dioxidation; Menadione; dHex; Lipoyl; Trimethyl
Instrument	Agilent instrument model; Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2016-06-23 03:13:12	ID requested
1	2016-10-11 02:52:31	announced
⏵ 2	2017-06-12 07:32:24	announced	Updated publication reference for PubMed record(s): 27663739.

Bandini G, Haserick JR, Motari E, Ouologuem DT, Lourido S, Roos DS, Costello CE, Robbins PW, Samuelson J, O-fucosylated glycoproteins form assemblies in close proximity to the nuclear pore complexes of Toxoplasma gondii. Proc Natl Acad Sci U S A, 113(41):11567-11572(2016) [pubmed]

curator keyword: Biological

submitter keyword: toxoplasma gondii, nucleus, AAL, lectin, affinity purification, LC MS/MS, fucose

Catherine E. Costello
contact affiliation	Boston University School of Medicine, Department of Biochemistry, Center for Biomedical Mass Spectrometry
contact email	cemsms@bu.edu
lab head
John Haserick
contact affiliation	Boston University
contact email	haserick@bu.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/10/PXD004426

PRIDE project URI

• PRIDE
  1. PXD004426
     1. Label: PRIDE project
     2. Name: O-fucosylated glycoproteins of Toxoplasma gondii