PXD004033-2

PXD004033 is an original dataset announced via ProteomeXchange.

Title	Metaproteomic Monitoring of Perinatal Mouse Gut Microbiota
Description	In the presented study, in order to unravel gut microbial community multiplicity and the influence of maternal milk nutrients (i.e., IgA) on gut mucosal microbiota onset and shaping, a mouse GM (MGM) was used as newborn study model to discuss genetic background and feeding modulation on gut microbiota in term of symbiosis, dysbiosis and rebiosis maintenance during early gut microbiota onset and programming after birth. Particularly, a bottom-up shotgun metaproteomic approach, combined with a computational pipeline, has been compred with a culturomics analysis of mouse gut microbiota, obtained by MALDI-TOF mass spectrometry (MS).
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:29:16.028.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Stefano Levi Mortera
SpeciesList	scientific name: Bacteria; NCBI TaxID: 2;
ModificationList	No PTMs are included in the dataset
Instrument	TripleTOF 5600

Revision	Datetime	Status	ChangeLog Entry
0	2016-04-22 03:09:52	ID requested
1	2016-10-13 05:36:53	announced
⏵ 2	2024-10-22 04:29:24	announced	2024-10-22: Updated project metadata.

Levi Mortera S, Del Chierico F, Vernocchi P, Rosado MM, Cavola A, Chierici M, Pieroni L, Urbani A, Carsetti R, Lante I, Dallapiccola B, Putignani L, Monitoring Perinatal Gut Microbiota in Mouse Models by Mass Spectrometry Approaches: Parental Genetic Background and Breastfeeding Effects. Front Microbiol, 7():1523(2016) [pubmed]

curator keyword: Biological

submitter keyword: Mouse Gut Microbiota (MGM), metaproteomics

Lorenza Putignani
contact affiliation	Bambino Gesu' Children's Hospital, Rome, Italy
contact email	lorenza.putignani@opbg.net
lab head
Stefano Levi Mortera
contact affiliation	Bambino Gesù Children's Hospital
contact email	stefano.levimortera@opbg.net
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/10/PXD004033

PRIDE project URI

• PRIDE
  1. PXD004033
     1. Label: PRIDE project
     2. Name: Metaproteomic Monitoring of Perinatal Mouse Gut Microbiota