PXD003907-2

PXD003907 is an original dataset announced via ProteomeXchange.

Title	Human Fecal Gut Microbiome proteomics
Description	5 human fecal gut samples, collected and prepared for standard MudPIT data collection from healthy volunteers, searched with the ComPIL database. x3 replicates each
HostingRepository	PRIDE
AnnounceDate	2016-08-04
AnnouncementXML	Submission_2017-04-20_23:58:56.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Greg Stupp
SpeciesList	scientific name: human metagenome; NCBI TaxID: 646099;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2016-04-05 02:55:39	ID requested
1	2016-08-03 16:14:57	announced
⏵ 2	2017-04-20 23:58:59	announced	Updated publication reference for PubMed record(s): 27528457.

Chatterjee S, Stupp GS, Park SK, Ducom JC, Yates JR, Su AI, Wolan DW, A comprehensive and scalable database search system for metaproteomics. BMC Genomics, 17(1):642(2016) [pubmed]

curator keyword: Metaproteomics, Biological, Biomedical

submitter keyword: microbiome fecal gut bacteria colon

Dennis Wolan
contact affiliation	Assistant Professor Department of Molecular and Experimental Medicine TSRI - California Campus USA
contact email	wolan@scripps.edu
lab head
Greg Stupp
contact affiliation	TSRI
contact email	gstupp@scripps.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/08/PXD003907

PRIDE project URI

• PRIDE
  1. PXD003907
     1. Label: PRIDE project
     2. Name: Human Fecal Gut Microbiome proteomics