PXD003817 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Tomato clade proteome |
Description | Members of the tomato clade exhibit wide diversity in fruit coloration, growth habit, leaf morphology and mating preferences. However, the mechanisms governing inter-species diversity in fruit coloration are largely unknown. Therefore, a proteomic approach combined with carotenoid profiling and carotenogenic gene expression was used to decipher the diversity in carotenogenesis in green-fruited Solanum habrochaites, orange-fruited S. galapagense, and red-fruited S. pimpinellifolium with S. lycopersicum, cv. Ailsa Craig (tomato). |
HostingRepository | PRIDE |
AnnounceDate | 2017-10-09 |
AnnouncementXML | Submission_2017-10-09_07:00:36.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Yellamaraju Sreelakshmi |
SpeciesList | scientific name: Solanum lycopersicum; NCBI TaxID: 4081; |
ModificationList | monohydroxylated residue; deamidated residue; iodoacetamide derivatized residue |
Instrument | LTQ Orbitrap Velos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2016-03-18 07:15:28 | ID requested | |
⏵ 1 | 2017-10-09 07:00:37 | announced | |
2 | 2017-10-26 03:13:37 | announced | Updated publication reference for PubMed record(s): 29048567. |
3 | 2024-10-22 04:08:22 | announced | 2024-10-22: Updated project metadata. |
Publication List
Dataset with its publication pending |
Keyword List
curator keyword: Biological |
submitter keyword: Red/orange and green fruited species, tomato clade, fruit proteome, chromoplast formation, chlorophyll degradation |
Contact List
Yellamaraju Sreelakshmi |
contact affiliation | Repository of Tomato Genomics Resources, Department of Plant Sciences, University of Hyderabad, Hyderabad 500046, India |
contact email | syellamaraju@gmail.com |
lab head | |
Yellamaraju Sreelakshmi |
contact affiliation | assistant Professor at University of Hyderabad |
contact email | syellamaraju@gmail.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/10/PXD003817 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD003817
- Label: PRIDE project
- Name: Tomato clade proteome